Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGHVVLSTPIVTMFVVYSLLMLYIGFYFYKQNETTEDYFLGDRSMGPVISALSAGASDMSGWLLMGLPGALY-VGGLINSHIAIGLSLGALINWVFVAKRLRIYTSVIANSITISDYFETRFSDDKHILRLISAFVILIFFIFYISSGLVSGAKLFEATFGIQY--TY--ALSIGTLIIVSYTFLGGYKAVCWTDLIQGLLMMSALIVVPIVMIIHLGGIGEGIKIIREIKPENLSFLQGSSVVAIISSLA-WGLGYFGQPHILVRFMSIRSI-RDVPKATTIGISWMVISLIGACVMGLLGVAYVHKFDLSLEDPEKIFIVMSQLLFNPWITGILLSAILAAVMSTASSQLLVSSSTIAEDFYATIFNKNAPQKLVMTISRLSVLGVACIAFFISTDKNASILSIVSYAWAGFGASFGSVILFSLFWSRMTRIGAIAGMLSGASTVILYDKFGKSFLDIYEIVPGFIVASVAIVAFSLFSSVRSGTKEAFETMLKEIESLKH |
| 3GIA Chain:A ((5-298)) | -----------------------------------------NKKLSLWEAVSMAVGVMIGASIFS-IFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKI----VSNAGPIAFIHKAIGDN--IITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITI-HPSYV-------IPDL-A---PSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVA---ISAIGNLPIDEL-IKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259079 for 2461 contacts (-105.3/contact) +
2D Compatibility (PS) -29654 + (NN) -2474 + (LL) 6504
1D Compatibility (HY) -11200 + (ID) 2100
Total energy: -298003.0 ( -121.09 by residue)
QMean score : 0.253
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