Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEWKTDTEEVKKVVGRCREFKRSLQEEKCSPFIKDLDSYALKIIVERRKTEMQLEKAIGELKKAKSNEDDAKVALRVLQGASVVSWIWPPARIAATAAIVAAEAVLKFMKEDTEKCKRNVELLERMLEIYSNQAKASANLMNQAWEGIKKRLHFYTDKHQEFIRRLKQASDAIDNEYNFPTPGVLLEYDFERPAISYTPKKSVFNERLKDLRENFSASLYADLKDKIHHNALSNDDLERMIAFREQEFEKSLEDWMGAYSYDENPNDELDRMAISKEQELEKSLEDLMPSVLGVPSYNESLTLAKNRCVKNFKEALEGFTEKIKESPNDSNAINEAFDNLETELERATENLSQKIDPVLERNENYTQKALEYREFLESRKESFIVDEKNPYPEEVSFNEWRWAEFDSVFSAIVPLEDLNKTACAHHALKALQATLKDNDLGFDATELEQIAKGFIPRGYLWHFDANVLGNLALVREELLLGVKHTKGYSLWTEFLQKQN |
4XKF Chain:B ((42-85)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QKAIDGITNKVNSIINKMNTQFEAVDHEFSNLERRIGNLNKRMEDGFLDVWTYNAELLVLLENERTLDLHDANVKNLYEKVKSQLRDNANDLGNGCFEFWHKCDNECMESVKNGTYDYPKYQKESKLNRQGI------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8352 for 168 contacts (49.7/contact) +
2D Compatibility (PS) -4580 + (NN) 186 + (LL) 28448
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 29706.0 ( 176.82 by residue)
QMean score : 0.198
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