Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTPKELDKLMLHYAGELARKRKEKGIKLNYVEAVALISAHIMEEARAGKKTAAELMQEGRTLLKPDDVMDGVASMIHEVGIEAMFPDGTKLVTVHTPIEANGKLVPGELFLKNEDITINEGKKAVSVKVKNVGDRPVQIGSHFHFFEVNRCLDFDREKTFGKRLDIASGTAVRFEPGEEKSVELIDIGGNRRIFGFNALVDRQADNESKKIALHRAKERGFHGAKSDDNYVKTIKE |
| 4UBP Chain:B ((5-126)) | -------------------------------------------------------------------------------------------------------NYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTELGGNREVFGISDLTNGSVDN--KELILQRAKELGYKGVE----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UBP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32146 for 820 contacts (-39.2/contact) +
2D Compatibility (PS) -13173 + (NN) -3705 + (LL) 9088
1D Compatibility (HY) -9200 + (ID) 3100
Total energy: -52236.0 ( -63.70 by residue)
QMean score : 0.556
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