Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIFLGMALAFSVSMAEKSGAFLGGGFQYSNLENQNTTRTPSANNNTPINTSMFGNNQAAPAQETPSVINTNNYGQMYGVDAMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYKRNFSIYFNYMINL |
| 4YOJ Chain:A ((188-249)) | ------------------------------------------------------FEDKQTHQLQLTDKYCTINVVAWLYAA-VLNGCKWFV-KPTRVGIVTYNEWALSNQFTEFVGTQSIDMLAHRTGVSVEQMLAAIQSLHAGFQGKTILGQSTLEDEFTPDDVNMQVMGVVMQ-------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8761 for 270 contacts (-32.4/contact) +
2D Compatibility (PS) -6065 + (NN) 3215 + (LL) 5932
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -12579.0 ( -46.59 by residue)
QMean score : -0.128
|
|
|