Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL
4BN0 Chain:A ((22-251))
VQKIGILGAMREQITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVAIQLVQHDVDLSAFDHPLGFIPESAIFIETSESLNALAKEVANEQHIVLKEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDN-------SFDAFLEKSAQTSAKFLKSMVDEL
General information:
TITO was launched using:
RESULT:
Template:
4BN0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163410 for 1884 contacts (-86.7/contact) +
2D Compatibility (PS) -23430 + (NN) -3797 + (LL) 416
1D Compatibility (HY) -34400 + (ID) 10700
Total energy: -235321.0 ( -124.90 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_4BN0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BN0-query.scw
PDB file :
Tito_Scwrl_4BN0.pdb
: