Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIHICCSVDNLYFLKKAKEAFAGEKIVGFFYNPNIHPYSEYLLRLEDVKRTCEMLGIELLEGDYELEKFLDKAKGKELLGEKSERCFECFDLRLEASALKAFELGEEKFTTTLLTSPKKDPNQLIAKGQHIAQRHNLEFVVFRNDNFEHFKSELDLNLQALARENELYRQNYCGCQFALKIQKESQNRSPFELYSPLKRQILPASIEERTQVFRELDAAKKDANKPFLAQKTIATYRLLNGGVWLSKNSNPLDCCILARSKSKAKVRINDLRWVFSQRLSALVGYSQRDETLFLTLEGLNTLMAKNYDNLKELNLNPLSYEEELSLRALVSGSESINPIIVLEERTEKTLFVEIKSIFQEEKVFYLL |
| 3TQI Chain:A ((236-334)) | ------GGVDSAVTATLVHKAI-GDQLVCVLVDTGLLRLNEVD---EVLNVFQKHLGAKVICVDAK-DRFMKALKGISD-P--EEKRKIAGEQFIRVFEEQAKKLNVKWLGQGTIYPDVIESKLIEPLRELFKDEVRKLGLELGLPADLIYRHPFPGPGLAIRILGEVSAEYINILKQADAIFIEELKKSDYYHQVSQAFAVFMPLKSVYGYIIALRAVKQWADLPHEFLSKVSHRIVNEIKEVSRVVYDMTNKPPATIEW----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8029 for 598 contacts (-13.4/contact) +
2D Compatibility (PS) -10950 + (NN) -7575 + (LL) 10100
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -18454.0 ( -30.86 by residue)
QMean score : 0.394
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