Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYIKFFKELNNKNVNLVGGKNASIGEMFQELVPIGIKVPDGFAITSEAYWYLLEQGGAKQKIIELLENVDATEIDVLKIRSKQIRELIFGTPFPSDLRDEIFQAYEILSQQYHMKEAD------VAVRSSATAEDLPDASFAGQQDTYLNIKGKTELIHYIKSCLASLFTDRAISYRASRGFDHLKVALSVGV-----QKMVRADKGSAGVMFSIDTETGFKDAVFITSAWGLGENVVGGTINPDEF-------------YVFKPTLEQNKRPIIKRQLGN---------KTQKMVYAPRGSEHP-----TRNIKTTKKEWQS---FSLSDEDVLI---------------------LAKYAIEIEKHYSKEAKQYRPM-DIEWAKDGESGEIFIVQ------ARPETVQ--------SQKTKEENQVFEKFK----FKNPNEKKEIILQGRAIGSKI------GSGKVRIINDLEHMNSFKEGE--ILVTDNTDPDWEPCMKKASAVITNRGGRTCHAAIVAREIGVPAIVGVS-------GATDSL--YTGMEITVSCAEGEEGYVYAGIYEHE-------IERVELSNMQETQTKIYINIGNPEKAFSFSQLPNHGVGLARMEMIILNQ---IKAHPLALVDLHHKKSVKEKNEIENLMAGYANPKDFFVKKIAEGIGMISAAFYPKPV--IVRTSDFKSNEYMRMLG-------GSSYEPNEENPMLGYRGA--SRYYSESYNEAFSWECEALALVREEMGLTNM-KVMIPFLRTIEEGK----KVLEILRKNNLESGKN-GLEIYIMCELPVNVILADDFLSLFDGFSIGSNDLTQLTLGVDR-------DSELVSHVFDERNEAML------KMFKKAIEACK--RHNKYCGICGQAPSDYPEVTEFLVKEGITSISLNPDSVIPTWNAVAKLEKELKDHGLTAR |
2DIK Chain:A ((2-855)) | -KWVYKFEEGNASMRNLLGGKGCNLAEM----TILGMPIPQGFTVTTEACTEYYNSG-------------------------KQITQ---------EIQDQIFEAITWLEELNGKKFGDTEDPLLVSVRSAAR------ASMPGMMDTILNLG----LNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKEEKGVHF--DTDLTADDLKELAEKF---KAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSW--DNPRAIVYRRMNDIPGDWGTAVNVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLENDMPDCYKQFMDLAMKLEKH-------FRDMQDMEFTI--EEGKLYFLQTANGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQLLHPTFNPAALKAGEVIGSALPASPGAAAGKVYFTAD-EAKAAHEKGERVILVRLETSPEDIEGMHAAEGILTVRGGMTSHAAVVARGMGTCCVSGCGEIKINEEAKTFELGGHTFAEGDYISLDGSTGKI----IETQEASVSGSFERIMVWADKFRTLKVRTNADTPEDTLNAVKLGAEGIGLCRTEHMFFEADRIMKIRKMILSD-----SVEAREEALNELIPFQKGDFKAMYKALEGRPMTVRYLDP-PLHEFVPHTEEEQAELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRLAVTYPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHGGD-PSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAALNNK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107827 for 5832 contacts (-18.5/contact) +
2D Compatibility (PS) -75203 + (NN) -17855 + (LL) 5448
1D Compatibility (HY) -31600 + (ID) 11150
Total energy: -238187.0 ( -40.84 by residue)
QMean score : 0.292
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