Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKELILKRIKEARAKHAIQGANPIYRNIIKVEFEDLVEEYKHFQVLNKAELIESAKENLEQAILKALENFQSKKVLHSTDLNLNF---EAFKDFTLQP-YDKEIEAMREELFEIDTALLHGVCGISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNLSEGVQALKNQGQNGALPTNMLLIGGPSRTADIELKTVFGVHGPQKVAVILY |
2XCS Chain:B ((155-272)) | ----------------------NPEHRALLQVKLEDAIEADQTFEML-MGDVVENRRQFIEDNAVYA------------NERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILY---GLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRFTEARMTKITLELLRDINKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XCS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3201 for 474 contacts (-6.8/contact) +
2D Compatibility (PS) -10464 + (NN) -3193 + (LL) 3308
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -21200.0 ( -44.73 by residue)
QMean score : 0.225
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