Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVNFFATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDYLELFEGHAEFNMVKDFCSRVYELSEFLDKK--LQVKYEDKGEPLKITWHSNCHALRVAKVIDSAKNLIRQLKNVELIELEKEEECCGFGGTFSVKEPEISAVMVKEKIKDIESRHVDVIVSADAGCLMNISTAMQKMGSLTKPMHFYDFLASRLGL |
2J0M Chain:A ((266-331)) | -----------------------------------------------------------------------------------------------ADFNQVQTIQ---YSNSEDKDRKGMLQLKIAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFI-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6919 for 378 contacts (-18.3/contact) +
2D Compatibility (PS) -6579 + (NN) 137 + (LL) 12228
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -4233.0 ( -11.20 by residue)
QMean score : 0.241
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