Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIKQILTILTPFFVATLLYFLGAPDGLNPNAWLYFCIFMGMIIGLILEPVPSGLIALSALVPCIALKIGASSEVASANKAISWGLSGYANKTVWLVFVAFILGLGYEKSLLGKRIALLLIRFLGQTPLGLGYAIGLSELCLAPFIPSNSARSGGILYPIVSSIPPLMGSTPSNNPDKIGAYLMWVALASTCITSSMFLTALAPNPLAMEIATKMGVNEISWFSWFLAFLPCGVVLILLVPLLAYKTCKPTLKGSKEVSLWAKKELESMGRFSLKEILMLSLTLLALLGWIFGKSLGLHASATALIVMVLMAFCKIVSYEDIIKNKSAFNIFLLLGSLLTMAGGLKNVGFLNFIGNAAQNFLEHAHLDPLIAVLFIVALFYLSHYFFASITAHVSALFALFVGIGSHIQGVNLQELSLFLMLSLGIMGILTPYGTGPSTIYYGSGYIQSKDFWKWGFIFGFLYLIVFLSVCAPWVKFIAYRWL
3RKO Chain:J ((134-145))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGPYVLAVELASMLLLAGLVVAFHVGREERAGEVL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -3836 for 38 contacts (-100.9/contact) +
2D Compatibility (PS) -1377 + (NN) -1215 + (LL) 34608
1D Compatibility (HY) -800 + (ID) 100
Total energy: 27280.0 ( 717.89 by residue)
QMean score : -0.335

(partial model without unconserved sides chains):
PDB file : Tito_3RKO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RKO-query.scw
PDB file : Tito_Scwrl_3RKO.pdb: