Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLNGLAGNLLIVVILLCVVVFFALKAIHIQKEQATNYYRYKDINALEAKNTQNHANYELVNQGSKK
2HI2 Chain:A ((8-24))
------------IVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTS
General information:
TITO was launched using:
RESULT:
Template:
2HI2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10081 for 60 contacts (-168.0/contact) +
2D Compatibility (PS) -1532 + (NN) -475 + (LL) 748
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -13990.0 ( -233.17 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_2HI2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HI2-query.scw
PDB file :
Tito_Scwrl_2HI2.pdb
: