Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASGLFENDEIKNNKARDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKH------------ERLQQEITELQSKNVRLQKRLFELRELRPRD
2XAS Chain:A ((409-460))
----------------------------------------------GQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQ-----
General information:
TITO was launched using:
RESULT:
Template:
2XAS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1451 for 144 contacts (10.1/contact) +
2D Compatibility (PS) -4535 + (NN) -3613 + (LL) 3220
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -7877.0 ( -54.70 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_2XAS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XAS-query.scw
PDB file :
Tito_Scwrl_2XAS.pdb
: