Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKMIGLVAVLSVLLARDNPFEPEINSKNLQGGFSGIYDDYLKEIHVDLPT-SARIL--KKITLTYQDIDGSIHSKVVGIDKSIDWHYPLKLSQHTLNQDAFEKRYQIQDFDFLMANNTMILRSPYKILRSFVLVNPYRIVLDTQKGPLDIYQNMDLNQKFFSHIKVGTHKDYYRITLILDGKYRYLLEEKNGAYELKLK |
| 3UWB Chain:A ((88-123)) | -----------------------------------------LFDEGCLSVPDQNGEVLRPKSIKVTFQNKDGKYKKWKLDGLAARVVQHEIDHLEGILFVDYFN------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 437 for 114 contacts (3.8/contact) +
2D Compatibility (PS) -3498 + (NN) 78 + (LL) 9220
1D Compatibility (HY) -3200 + (ID) 450
Total energy: 2587.0 ( 22.69 by residue)
QMean score : 0.035
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