Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSITIPIVIAFDNHYAIPAGVSLYSMLACAKSENPKSQNPQLQSDNKK-----LFYKIHCLVDNLSLENQQKLKETLVPFSAFASVDFLDIS----TPNLYTTSVEPSVIDKIHEAFLQLNIYAKTRF--------------------SKMVMCRLFLASLFPQYDKIIMFDADTLFLNDVSESFFIPLDSYYFGAAKDFSSPKSLKHFQTEREREPRQKFSLYEHYLKEKDMQIICENHYNVGFLIVNLKLWRADKLEEHLLNLTHQKGQCVFCPEQDLLTLACYQKVLQLPYIYNAHPFMANQKRFIPNQQEIIMLHFYFVGKPWILPTALYSKEWHEILLKTPFYAEYSVKFLKQMTECLSLQDKQKTFEFLAPLLNPKTLLEYVFFRLSKIFKRLKERFLNS |
| 3IXW Chain:A ((340-488)) | -------------------------------------ENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLA---PKYDEL-----NNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18086 for 471 contacts (-38.4/contact) +
2D Compatibility (PS) -12246 + (NN) -617 + (LL) 9192
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -31007.0 ( -65.83 by residue)
QMean score : 0.094
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