Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEVLMIEDDIELAEFLSEFLLQHGIHVINYDEPYTGISAANTQNYDLLLLDLTLPNLDGLEVCRRISKQKH-IPIIISSARSDVEDKIKALDYGADDYLPKPYDPKELLARIQSLL-RRSHKKEEVSEPGDANIFRVDKDSREVYMHEKKLDLTRAEYEILSLLISKKGYVFSRESIAIESESINPESSNKSIDVIIGRLRSKIEKNPKQPQYIISVRGIGYKLEY
1YS7 Chain:A ((31-230))
------------------------GFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFA-DTNVVDVFIGYLRRKLEAG---PRLLHTVRGVGFVLRM
General information:
TITO was launched using:
RESULT:
Template:
1YS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88882 for 1501 contacts (-59.2/contact) +
2D Compatibility (PS) -20679 + (NN) -8052 + (LL) 3028
1D Compatibility (HY) -16000 + (ID) 3200
Total energy: -133785.0 ( -89.13 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_1YS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YS7-query.scw
PDB file :
Tito_Scwrl_1YS7.pdb
: