Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLEL---LALLETFIEKEDLEERFESFAKALRMDEELQQKIESRKTDIVIQSMANILSGNE
3MEJ Chain:A ((82-167))
-----------GHGYDKFTHAHAYGGVDLTVKTVEEMLDIPVDYVVESNFTAFEDVVNELNGVKVTVKSDKVIQQIKKDTKGKVVLQKGTHTLDGEE
General information:
TITO was launched using:
RESULT:
Template:
3MEJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17232 for 417 contacts (41.3/contact) +
2D Compatibility (PS) -8991 + (NN) -3278 + (LL) 1120
1D Compatibility (HY) -4000 + (ID) 950
Total energy: 1133.0 ( 2.72 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_3MEJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MEJ-query.scw
PDB file :
Tito_Scwrl_3MEJ.pdb
: