Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALPVYYDKDIDLGVIQSLQVGIIGYGVQGEAQALNLRDSKVKVRIGLYQGSL-----SVSKAKKEGFEVLGVKELVQQSDVIMALLPDELHKEVLEKEVIPFLKEGQIIGFAHGFSVHFNQVVLPKGVGAILVAPKGPGSALREEYLKNRGLYHLIAIEQESSIHN-AKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIVRMGFETLIKAG----YPEELAYFECVHEVKLVADLLHYKGVEGLRKHISNTAEFGAIKAREPMGNLLEKRMQKILKKIQNGAFAKDFLLEKSLNYPRLNTERKALKETKIEQIGEILRAPFNHKK |
| 1YRL Chain:A ((35-340)) | ---------------LQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSDVV-RTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGW----ETITEALKQGGITLMMDRLSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREETGKTAFETAPQYEGKIGEQEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130513 for 2261 contacts (-57.7/contact) +
2D Compatibility (PS) -32691 + (NN) -17637 + (LL) 1636
1D Compatibility (HY) -20800 + (ID) 5100
Total energy: -205105.0 ( -90.71 by residue)
QMean score : 0.452
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