Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFKILATSFSLFLNSWLKRSKLSSVPFLSKRQISKSVQAIKIDANNKAIKYPPSVDNTVHNRMLSGSLNFNTENTNPKKNPTTTEKWIKF
2L27 Chain:B ((305-313))
----------------------------------------------------PISLDLTFN------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2L27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -744 for 25 contacts (-29.8/contact) +
2D Compatibility (PS) -1031 + (NN) -1721 + (LL) 5428
1D Compatibility (HY) -800 + (ID) 200
Total energy: 932.0 ( 37.28 by residue)
QMean score : 0.157
(partial model without unconserved sides chains):
PDB file :
Tito_2L27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L27-query.scw
PDB file :
Tito_Scwrl_2L27.pdb
: