Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADILSQ-EEIDALLEVVDEN---------VDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQVSSIMRSIVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQVMQILKEVWSPVVEMYPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDFMLSETNSKKSRNKELQALLSGVSVDMMVFLGAVELSLKEMLDLDVGDTIRLNKVANDEVSVYVHKKKRYLASVGFQGYRKTIQIKEVVYSEKERTKEILEMLEEQRRGKVGDIMKIEEE |
3J9U Chain:C ((485-563)) | MKEILSNAEELEQVVQLVGKSALSDSDKITLDVATLIKEDFLQQNGYSTYDAFCPIWKTFDMMRAFISYHDEAQKAVANGANWSKLADSTGDVKHAVSSSKFFEPSRGEKEVHGEFEKLLSTMQERFAESTD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1488 for 325 contacts (4.6/contact) +
2D Compatibility (PS) -7407 + (NN) -3811 + (LL) 17920
1D Compatibility (HY) -6000 + (ID) 950
Total energy: 1240.0 ( 3.82 by residue)
QMean score : 0.404
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