Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLETLESILERLRMSIKKNGLKNSKQREEVVSVLYRS-GTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFICVLETSKSGRRYEIAAKEHHDHIICLHCGKIIEFADPEIEHRQNEVVKKYQAKLISHDMKMFVWCKECQESDD
2W57 Chain:A ((7-133))
----------------ALKDAGLKVTLPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIEFSDDVIEQRQKEIAAKYNVQLTNHSLYLYGKC--------
General information:
TITO was launched using:
RESULT:
Template:
2W57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40594 for 810 contacts (-50.1/contact) +
2D Compatibility (PS) -13359 + (NN) 522 + (LL) 2328
1D Compatibility (HY) -10400 + (ID) 1950
Total energy: -63453.0 ( -78.34 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_2W57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W57-query.scw
PDB file :
Tito_Scwrl_2W57.pdb
: