Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSNALSVGEIAHLINVSHSSVHNWIKTNLLEKLEIDHKIYVKTSSFLDFCRNHLGKNKLNRYANKSLKSAHNHQELILKYLEMLENSSDLENLGSYYEKELSNTTRNLEGIYYTPNRIVEQLFTLPKDFDTTQAIFCDPAVGSGNFVMHALKLGFKVENIYGYDTDAFAVALTKKRIKERYRLDCPNIMQ---KDFLSLKHAPQFDCIFTNPPWG-----KKYN----QNQKENFKQQFNLHQS-LDSASLFFMASLNCLKENAYLGLLLPESCLNIDAFSKMREMALKFQMRSLIDFDKPFKNLMTKAVGLALKKTHNKDQKISCF-YQNSEFKRSPSSFFNNP---KKIFNIHCSHQK-----NKILDHLFSL----------PHITLKNNAHFAL-GIVTGNNKEKLHPKQEKNTIPIFRGSDILKDRLKAPSQFINADLKDCQQVAPLSLYQAREKIVYKFISSKLVFFYDNKQRLFLNSANMFVLKENFPINAHALKELLNSDLMQFIFESLFK---THKILRKDLECLPLFAQFINNSFDEKFYLKNLGIEKKDPKHFTIRKNHACCLSFGFRG |
| 2NP6 Chain:A ((20-409)) | ---------------------------------------------------------------------------------------------------------------RVETPPEVVDFMVSLAEAPRGGRVL--EPACAHGPFLRAFREAHGTAYRFVGVEIDPKA-------------LDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKS---GKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKN----HSGLWMPKERAK--------ELRD--------FYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLLP-KEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLRM-LERLPVRREYGFHT------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150424 for 2740 contacts (-54.9/contact) +
2D Compatibility (PS) -37190 + (NN) -6840 + (LL) 12304
1D Compatibility (HY) -19600 + (ID) 4350
Total energy: -206100.0 ( -75.22 by residue)
QMean score : 0.374
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