Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGWIGLGAMGTPMATRLRDAGLEVSVYNRTESKAAPLKEKGVAVYTSPIDLAAKVDLVFTMLSD-KAAIDAVLAPKFWEQMSK--KIVVNMSTIAPLESLSLEKIAQKHQATYLEAPVSGSVGAAKAGALLILAAGDEEVISKLKPVLAHLGSQTFYLGKVGQGTGAKLSINSLLAQMGVAYSEALLLAKRLGVDAESFLQIIGQSGMNSPLFQAKKGMWLQDNYPAAFSLKLMAKDIRLAKNEAGEAMK--LPFLFQAEELYSQAEKSGLGGLDMAAVYHYLEKGEH |
| 2UYY Chain:A ((32-312)) | -KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAI-ALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYIH--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184035 for 2406 contacts (-76.5/contact) +
2D Compatibility (PS) -30639 + (NN) -16793 + (LL) 500
1D Compatibility (HY) -21200 + (ID) 4600
Total energy: -256767.0 ( -106.72 by residue)
QMean score : 0.542
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