Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHHTPMNTPLKLSVQALERYFLGQLFEFDAPLDLIGTFFQKQVWSALMTIPYGKTKSYDEIAKLINNPKSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNERAKNFLIS
4ZYE Chain:A ((23-159))
--------------PLGYITVAKDDKGFIMLDF-CDCVEGNSRDDSSFTEFFHKLDLYFEGKPINLREPINLKTYPFRLSVFKEVMKIPWGKVMTYKQIADSLGT--SPRAVGMALSKNPILLIIPCHRVIAENG-IGGYSRGVKLKRALLELEGVKIPE--------
General information:
TITO was launched using:
RESULT:
Template:
4ZYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85366 for 976 contacts (-87.5/contact) +
2D Compatibility (PS) -14738 + (NN) -4354 + (LL) 1800
1D Compatibility (HY) -13200 + (ID) 2400
Total energy: -118258.0 ( -121.17 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_4ZYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZYE-query.scw
PDB file :
Tito_Scwrl_4ZYE.pdb
: