Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNFYQKIYTHKVVFSSLFFLLFLFNVETLLFSHFSDDFSQLFFLFENHVYDFIIKLDYLGLIGVSSIYLLALILKPFTLTRQKCACIGILCLSFYAWNFPIKNSSIALYVFYFALLGTLLWRFLGASMKQSFLPSMNICVVWVFASSLQSFRFLSVSDCVDFSLFILALFLLILVLIYHKRLFGLYEYANTLILIVGLCVVVLCSSMFIQTKEYYGMRLGFYFLGLLGWLLEYIHNTLRRLEHKI |
1IIJ Chain:A ((28-34)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GILIKRRR---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150 for 18 contacts (-8.3/contact) +
2D Compatibility (PS) -568 + (NN) 2033 + (LL) 22304
1D Compatibility (HY) -400 + (ID) 100
Total energy: 23119.0 ( 1284.39 by residue)
QMean score : 0.538
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