Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNR-EQVLENAKTYKEQIYKILDQKHTE----VCFNSAWLDALGAKGMIELCAK-FSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSD-DLM--WRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSAN----LLPEILLESDFDEGV----------GVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESY-----RFVKGNY-VIQLGKKRFMKLNIN |
| 2JAN Chain:A ((33-415)) | --------------------------------------MTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGDPRDVGE--RSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLA-GEGISYTEFSYLLLQANDYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQK-LGATVHALTVPLVTAADGTKFGKSTGGGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQAT----AQRPQQRAAQRRLASELTVLVH-GEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPDGIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRSIAGVERI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131971 for 2481 contacts (-53.2/contact) +
2D Compatibility (PS) -37528 + (NN) -14698 + (LL) 3952
1D Compatibility (HY) -16400 + (ID) 5950
Total energy: -202595.0 ( -81.66 by residue)
QMean score : 0.534
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