Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLNNKHREKGLKAEEEACGFLKTLGFEMIERNFFSQFGE--IDIIALKKGVLHFIEVKSGENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
1HH1 Chain:A ((9-63))
------------SAVERNIVSRLRDKGFAVVRAPA------PIPDIIALKNGVIILIEMKSRKDIEGKIYVRREQAEGIIEFARKSGGSLFLGVKKPGVLKFIPFEKLRRTETGNY
General information:
TITO was launched using:
RESULT:
Template:
1HH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20673 for 230 contacts (-89.9/contact) +
2D Compatibility (PS) -5131 + (NN) -2088 + (LL) 948
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -31344.0 ( -136.28 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1HH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HH1-query.scw
PDB file :
Tito_Scwrl_1HH1.pdb
: