Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE-MQEEGVREAIAKLDNTDFMGRTIRVTEANPKKS
1WHW Chain:A ((40-118))
---LFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKE
General information:
TITO was launched using:
RESULT:
Template:
1WHW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48241 for 491 contacts (-98.3/contact) +
2D Compatibility (PS) -8437 + (NN) -3226 + (LL) 192
1D Compatibility (HY) -6800 + (ID) 1500
Total energy: -68012.0 ( -138.52 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_1WHW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WHW-query.scw
PDB file :
Tito_Scwrl_1WHW.pdb
: