Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNHQNMLDNQTILITGGTGSFGKRFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGV--DICIHAAALKHVPIAEYNPLECIKTNIMGASNV-----INACLKNEISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGPSQTQFGVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMIDLAKALAP--NIPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGQKVAPDFEYSSHTNNQWLEPDDLLKLL |
4TQG Chain:A ((3-288)) | -------INDKTIMIFGGSGSLGNRLIETYI---NNNIIVNYSRDESKHWSMELKYKSDKLKNIIGDIRDFEKVQQSIMRINPDIIIIAAALKHIDRCEYEINECLDTNIKGLQNVLKVTEINRSNLSNLKAVCFVSTDKACSPVNSYGMSKAICETLVVEKSKY--IKDIKYVCVRYGNVLN-------------------FTLTHTSMTRFIMTLDDSVKLIEYAIINGNSGEIVIPKLNSMYIKDMIELFADKY--PIVITGLRSGERMYESLINDTQSMKTVPKGDYYHILPTYDPTIVTEEFYEYSSKQNILSKQELENYLNQ-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127158 for 2027 contacts (-62.7/contact) +
2D Compatibility (PS) -27543 + (NN) -9931 + (LL) 2464
1D Compatibility (HY) -23600 + (ID) 4750
Total energy: -190518.0 ( -93.99 by residue)
QMean score : 0.385
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