Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGLIGVVEKISALEAHIEVQGVVYGVQVSMRTAALLQTGQKARLKILQVIKEDAHLLYGFLEESEKILFERLLKINGVGGRIALAILSSFSPNEFENIIATKEVKRLQQVPGIGKK--------LADKIMVDLIGFFIQDENRPARNEVFLALESLGFKSAEINPVLKTLKPHLSIEAAIKEALQQLRS
2ZTE Chain:A ((1-131))
MIASVRGEVLEVALDHVVIEAAGVGYRVNATPATLATLRQGTEARLITAMIVREDSMTLYGFPDGETRDLFLTLLSVSGVGPRLAMAALAVHDAPALRQVLADGNVAALTRVPGIGKRGAERMVLELRDKV------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87808 for 873 contacts (-100.6/contact) +
2D Compatibility (PS) -13120 + (NN) 487 + (LL) 5148
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -104793.0 ( -120.04 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_2ZTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZTE-query.scw
PDB file :
Tito_Scwrl_2ZTE.pdb
: