Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVRGVLSLQARLSFKNCFLVKSLKPSQLTLMLTGFLGGFSFLTTGFW
1G6A Chain:A ((97-160))
----------------------------------------------------------------LDDACFATMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDR-IEPD----LNEGKLGDLRDTTTPKA
General information:
TITO was launched using:
RESULT:
Template:
1G6A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27068 for 361 contacts (-75.0/contact) +
2D Compatibility (PS) -6365 + (NN) 1478 + (LL) 3668
1D Compatibility (HY) -400 + (ID) 1000
Total energy: -29687.0 ( -82.24 by residue)
QMean score : 0.108
(partial model without unconserved sides chains):
PDB file :
Tito_1G6A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G6A-query.scw
PDB file :
Tito_Scwrl_1G6A.pdb
: