Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEHKEIVIGVDIGSRKICAIVAEFKDGILRIIGTAHQDSKEINSKAIKRGRINSLAHASNAIKEVINSAKKMAGLNADEDRNNPISSFRESYHPKTKAIVSFSGAYTESIRDVTGVASTKDNVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQEVNDPLGMSGTRLEVFIHIVYTEKNNIENLEKIMIQSGVEIENIVINSYAASIATLSNDERELGVACVDMGGETCNLTIYSGNSIRYNKYLPVGSHHLTTDL------SHMLNTPFPYAEEVKIKYGDLSFESGAETPSQSVQIPTTGSDGHES--HIVPLSEIQTI--MRE---RALETFKIIHRSIQDSGFEEHLGGGVVLTGGMALMKGIKELARTHFTNYPVRLATPVEKYNIMGMFEDLKDPRFSVVVGLILYKAGGHTNYERDSKGIIRYHESDDYIRKAHQSNPTPHIHSSPTERNLSDLKTPSAPLNTAKNDDFLPIKPTEQKGFFQNLLDKISKIF |
4CZL Chain:A ((150-330)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSMVVDIGGGTTEVAVLSLSGIVYSRSVRVGGDKMDEAIISYMRRHHNLLIGETTAERIKKEIG----TARAPADGEGLSIDVKGRDLMQGVPREVRISEKQAADALAEPVGQIVEAVKVALEATPPELADDIADKGIMLTGGGALLRGLDAEIRDH-TGLPVTVADDPLSCVALGCGKVLEHPKWMKGVLESTLA-------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -52235 for 1210 contacts (-43.2/contact) +
2D Compatibility (PS) -18732 + (NN) -10056 + (LL) 19184
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: -71289.0 ( -58.92 by residue)
QMean score : 0.388
|
|
|