Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEIKTLLVDFFPQAKHFGIILIKAIVVFCIGFYFSFFLRNKTMKLLSK--------KDEILANFVAQVTFILILIITTIIALSTLGVQTTSIITVLGTVGIAVALALKDYLSSIAGGIILIILHPFKKGDIIEISGLEGKVEALNFFNTSLRLHDGRLAVLPNRSVAN-SNIINSNNTACRRIEWVCG-------VGYGSDIELVHKTIKDVIDGMEKIDKNMPTFIGITDFGQSSLNFTIRVWAKIED-GIFNVRSELIERIKNALDANRIEIPFNKLDISINKQDSSK |
| 3T9N Chain:A ((16-281)) | -------------KAVKFLLDVLKILIIAFIGIKFADFLIYRFYKLYSKSKIQLPQRKIDTLTSLTKNAVRYIIYFLAGASILKLFNIDMTSLLAVAGIGSLAIGFGAQNLVKDMISGFFIIFEDQFSVGDYVTINGISGTVEEIGLRVTKIRGFSDGLHIIPNGEIKMVTNLTKDSMMAVVNIAFPIDEDVDKIIEGLQEICEEVKKSRD---EG--------PTVLGITDMQDSKL--VIMVYAKTQPMQKWAVERDIRYRVKKMFDQKNISFPYPRTTVILSEKKT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98143 for 1473 contacts (-66.6/contact) +
2D Compatibility (PS) -25278 + (NN) -2858 + (LL) 2252
1D Compatibility (HY) -22000 + (ID) 3100
Total energy: -149127.0 ( -101.24 by residue)
QMean score : 0.254
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