Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFDTLMGMFVEPSQKVAKSLAEHVGSFFHAQLI--LNTIITILF--MIWAYKRVKEGDMFEFKTAMGVVVFIAFVGFINWGIKNPNDFNTYFINTIFYPSEKLAILIAQSLNDGLEIPTNTNLSPSEIFSIGNLASSAYAMIVNLWDNAFDGINMFNWLTMIPKIIMFFLVILGELLFLGLLLIIVLLVTAEIFMWSALGLIVLPLGLIPQTKGMLFSYLKKLISLTLYKPCMMLVAFFNYGIIYKVNTLIPTKHEVTQGFYGNADKMANEGKIIDVFGNVLKGDWNSYIAHSSIVGFLTIIVLGSVICFFLVKRVPDFINNIFGTSGGVGAVTEMMQKIGMTIGGAVFGGSAVMVANQVKQAYQSAGGGLAGLQAGAKAFGLGAISGGASAMANHRSVKAGVKHFVASVKSGFGFDNDKNNK |
| 4MOB Chain:A ((176-248)) | --------GTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPSTVGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITFPRIQPISKDDFRRYRGAIARKRIRLG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52728 for 353 contacts (-149.4/contact) +
2D Compatibility (PS) -7203 + (NN) 2584 + (LL) 21152
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -39645.0 ( -112.31 by residue)
QMean score : 0.112
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