Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI--ECVEVLRCEDFESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDFVQMTNNHWTFSIETTRQCLNLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQ--NSDGSLKVLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGDYPICRLTLDTFCSMLGTLAADVALTLGA-RGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVMKKTPGLDGAGIALENYLLHDRI |
| 1SZ2 Chain:A ((14-330)) | ------KYALVGDVGGTNARLALCDIA-SGEISQAKTYSGLDYPSLEAVIRVYLEEHK-V---EVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRW---VSLPGEGGHVDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRL------PENLKPKDITERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFG-GVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SZ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237239 for 2687 contacts (-88.3/contact) +
2D Compatibility (PS) -32791 + (NN) -5788 + (LL) 1300
1D Compatibility (HY) -24000 + (ID) 6450
Total energy: -304968.0 ( -113.50 by residue)
QMean score : 0.518
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