Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNISVNPYLMAVVFVVFVLLLWAMNVWVYRPLLAFMDNRQAEIKDSLAKIKTDNTQSVEIGHQIETLLKEAAEKRREMLAEAIQKATESYDAVIKQKENELNQEFEAFAKQLQNEKQILKEQLQAQMTVFEDELNKRVAMGLGS |
1GE9 Chain:A ((97-172)) | ------------------------------------------------------------GNVIRVTLPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELEGISEDEKKRALERLQKLTDKYIDEINKLMEAKEKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16121 for 372 contacts (43.3/contact) +
2D Compatibility (PS) -8751 + (NN) -5511 + (LL) 6172
1D Compatibility (HY) 0 + (ID) 1050
Total energy: 6981.0 ( 18.77 by residue)
QMean score : 0.560
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