Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVFKRLEKLFSKIQNDKVYGVEHGVEVVKSLASAKFDETVEVALRLGVDPRHADQMVRGAVVLLHGTGKKVRVAVFAKDIKQDEAKNAGADVVGGDDLAEEIKNGRIDFDMVIATPDMMAVVG-KVGRILGPKGLMPNPKTGTVTMDIAKAVTNAKSGQVNFRVDKKGNVHAPIGKASFPEEKIKENMLELVKTINRLKPSSAKGKYIRNAALSLTMSPSVNLDAQELMDIK
3U56 Chain:A ((6-228))
------KRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTVMGPSVRINPHS-----
General information:
TITO was launched using:
RESULT:
Template:
3U56.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112317 for 1806 contacts (-62.2/contact) +
2D Compatibility (PS) -24136 + (NN) -14145 + (LL) 1420
1D Compatibility (HY) -17600 + (ID) 5450
Total energy: -172228.0 ( -95.36 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_3U56.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U56-query.scw
PDB file :
Tito_Scwrl_3U56.pdb
: