Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKKKHKIPTLKYFLRSLKQIYRLITFKEKMIFFLLVLMAVFSSFVEVMSLTLLMPFITLASDPSRALDDKDWKMVYDFFHFSSPVRLMYFFSFCLVGIYLFRMFYGVFFTYLRGRFSNKKAYQIKQQLFLQHIKNNYLSHLNHNLDSLRDIINNKAEGMFMSFNAFLSLLTEITVIVFFYSTLILTNWKITLVFTTILALQIFFIVKKVTVLIKKKGEMAAKSKAQTLKVFSKFFSNFKITKLKDNHEEAHKLFGENSRKAHDTEIIYSTLQVVPRYSIETVGFSLLILAVAYILFKYGEARMVLPTISMYALALYRILPSVTGVISYYNEIAYNQLATNVVFKSLSKTIVEEDLVPLDFNEKITLQNISFAYKSKHPV-LKNFNLTIQKGQKIALIGHSGCGKSTLADIIMGLTYPKSGEIFIDNTLLTSENRRSWRKKIGYIPQNIYLFDGTVGDNIAFGS-AIDEKRLIKVCKMAHIYDFLCE-HEGLKTQVGEGGAKLSGGQKQRIGIARALYDNPEILVLDEATSALDNETESKIMDEIYQIAKNKTLIVIAHRLSTIERCEVIIDMSQHKDNLG |
| 2PMK Chain:A ((4-216)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167486 for 1613 contacts (-103.8/contact) +
2D Compatibility (PS) -22068 + (NN) -881 + (LL) 33604
1D Compatibility (HY) -20400 + (ID) 4750
Total energy: -181981.0 ( -112.82 by residue)
QMean score : 0.545
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