Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTEMKSFLKLFAQPLLVVLAFMLLYALAHAVLGFYVKKDSAPMSPNVEKSETERQNSTFSPKEEANATTTA-----TEQNPTKDTVPPLDTATQKQEIKQEIKQEIKQEIKQEIKQEIKQEIKQETKQEQEKENKPKQNSVSPVQNDQKTPTTPLMGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLIKNKSVKVLEIQNDWAEIEFSHETKGYVFLKLLKKAE |
2ZHJ Chain:A ((5-81)) | -----------------------------------------------ETKGGTVKAASGFNATEDAQVLRKAMKGLGTDEDAIIGVLACRNTA-QRQEIRTAYKSTIGRDLLEDLKSELSSNFEQVILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTAGGRDEGNYLDDALVKQDAQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33004 for 426 contacts (77.5/contact) +
2D Compatibility (PS) -7260 + (NN) 1689 + (LL) 4620
1D Compatibility (HY) -2800 + (ID) 950
Total energy: 28303.0 ( 66.44 by residue)
QMean score : 0.413
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