Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDHLKHLQQLQNIERIVLSGIVLANHKIEEIHSVLEPSDFYYPPHGLFFEIALKLH-EVNCPIDENFIRQKMPKD---KQISEDDLVAIF--AASPIDNIEAYVEEIKNASIKRKLFTLANTIREQALESAQKSSDILNAVEREVYALLNGSTIEGFRGIKEVLESTMNLITENQRKGSLKVTGIPTGFVQLDNYTSGFNQGSLVILGARPSMGKTSLMMNMVLSALNDD-RGVAVFSLEMSAEQLALRALSDLTSINMHDLESARLDDDQWENLAKCFDHLSQKKLFFYDKSYVRMDQIRLQLRKLKSQHKELGIAFIDYLQLMSGNKATKERHEQIAEISRELKTLARELEIPIIALVQLNRSLENRDDKRPILSDIKDSGGIEQDADIVLFLYRGYIYQMRAEDNKIDKLKKEGKVEEAQELHLKVNEERRIHKQNGSIEEAEIIVAKNRNGATGTVYTRFNAPFTRYEDMPVDSHLEEGQETKFEMPTT |
| 4NMN Chain:A ((5-432)) | ----------ESAERAVLGSMLEDPENIPLVLEYLKEEDFCIDEHKLLFRVLTNLWSEYGNKLDFVLIKDHLEKKNLLQ---IDWLEELYEEAVSP-DTLEEVCKIVKQRSAQRAIIQLGIELIHKGKENKDFHTLIEEAQSR-IFSIAES--STQFYHVKDVAEEVIELIYKFKSSDRL-VTGLPSGFTELDLKTTGFHPGDLIILAARPGMGKTAFMLSIIYNLAKDEGKPSAVFSLEMSKEQLVMRLLSMMSEVPLFKIRSGSISNEDLKKLEASAIELAKYDIYLDDTPALTTTDLRIRARKLRKE-KEVEFVAVDYLQLLRPPVRKSPRQEEVAEVSRNLKALAKELRIPVMALAQLSREVEKRSDKRPQLADLRESGQIEQDADLILFLHRPEYYTKKPN-------------------------EQGI---------AEVIIAKQRQGPTDIVKLAFIKEYTKFANLE------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NMN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201972 for 3025 contacts (-66.8/contact) +
2D Compatibility (PS) -45116 + (NN) -23857 + (LL) 4892
1D Compatibility (HY) -35200 + (ID) 7200
Total energy: -308453.0 ( -101.97 by residue)
QMean score : 0.510
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