Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDRKLLLQDFDKVALSLKKRNHAMDDELERLREAIAHYKKQL---IELEGLQAFQNKVSKEFGIKMAQKMDTSDLKKELENNKIKLNELSKSVGEAEQEMDLKLSIIPNLVDEKTPLGASEEDNIEIKKILTPRNFTFKPKE------------HFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKI---ENENLYLIPTAEVTLTNLYNDTIIS--VENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQEHMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQ---LVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL |
| 3QNE Chain:A ((14-435)) | ---------DPEIIKASQKKRG----DSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESV-VDSQDEENNELVRTWTPENYK-KPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDGEDEK-YLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAG-----AWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGI-----EKKYVHCLNSTLSATERTICCILENYQKEDGLV-IPEVLRKYI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93088 for 3075 contacts (-30.3/contact) +
2D Compatibility (PS) -42333 + (NN) -25358 + (LL) 1756
1D Compatibility (HY) -25200 + (ID) 6500
Total energy: -190723.0 ( -62.02 by residue)
QMean score : 0.441
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