Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDEKLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPLVTPSKVSPTNEVKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPNNTSSADASENNESNENRDNVEKQAIRDPNIKEFACGKWVYDDENLQAYRPSILKRVDKDKEITTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQARSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNELNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV |
| 1W6S Chain:B ((59-73)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKTGKFEYDVAKISA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W6S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3272 for 53 contacts (-61.7/contact) +
2D Compatibility (PS) -1481 + (NN) -13 + (LL) 26748
1D Compatibility (HY) 0 + (ID) 250
Total energy: 21732.0 ( 410.04 by residue)
QMean score : 0.343
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