Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGTFFSKWGKWILVLGLVFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKA--IAKTSNNWYRFSFKGKNGYVSGKYVKAATATPTPKPPTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKSNPNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAWVSKFHGFSVHAITITGYDKNNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY |
4KRT Chain:A ((232-296)) | ----------------------------------------------LNIRAKGTTNSKIIGSIPAGETFKIKWVDEDYLGWYYVEYNGVVGYVNADYVEKLQMATTYNVST-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14070 for 337 contacts (-41.8/contact) +
2D Compatibility (PS) -6720 + (NN) 68 + (LL) 13160
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -14112.0 ( -41.88 by residue)
QMean score : 0.462
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