Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDYIIAAHGRYAQEVKDSCQMITGQTTNISAITFTE----EMGVTDVLDAYMAVYSPVNETAIIVDIVGGTPCNAAQMFSTKHPEVKVVSGLSLGLIIPL-------SLGESLEEAMLGAKDNIQFVEQKASHTIVSDDGEEED
3LFH Chain:A ((7-129))
---LIITHGDFGKGLLSGAEVIIGKQENVHTVGLNLGDNIEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIA-LSMMKEYDVKVITGINMPMLVELLTSINVYDTTELLENISKIGKDGIKVI-----------------
General information:
TITO was launched using:
RESULT:
Template:
3LFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79473 for 753 contacts (-105.5/contact) +
2D Compatibility (PS) -12192 + (NN) -3381 + (LL) 1092
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -104604.0 ( -138.92 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_3LFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LFH-query.scw
PDB file :
Tito_Scwrl_3LFH.pdb
: