Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNEMEKVALKTAVPAGVKLSILTVKGAANNINNDKYAGQQVFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLAQKGIKITAQMVPSEDAVEFANLLKK
3P3V Chain:A ((11-109))
---------RVDERLIHGQ-GQLWVKFLNCNTVIVANDAVSEDKIQQSLMKTVIPSSIAIRFFSIQKVIDIIHKASPA-QSIFIVVKDLQDAKLLVEGGVPITEINIGNI----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3P3V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72765 for 731 contacts (-99.5/contact) +
2D Compatibility (PS) -10289 + (NN) -1077 + (LL) 4040
1D Compatibility (HY) -10400 + (ID) 1550
Total energy: -92041.0 ( -125.91 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_3P3V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P3V-query.scw
PDB file :
Tito_Scwrl_3P3V.pdb
: