Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYLICSDLDGTLL-LKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFAKLVHPKA--DVIASNGGVVAVSGEIIQQEKMKQSALLETFLLCQNHDLPVFFFSTDTVFYTKNPPYYFTDEEDKGRVNATKLVAIK---SREIFLEHADQFINGIVIEEEDFDKLAVLRSDLEKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKHLNR |
| 1YMQ Chain:A ((8-256)) | --------DIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQ------MTPFITEEEE-------KEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79181 for 2069 contacts (-38.3/contact) +
2D Compatibility (PS) -26639 + (NN) -11855 + (LL) 2424
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -132551.0 ( -64.07 by residue)
QMean score : 0.399
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