Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVETIDVFSPVELYLLLSPIEAQHLFGVP-DKLTFLLKGE--DVFAEGFDRLKSKGILNEAGELTDGGGFLIDSLIEYYQSKKYVRMNQLMFAFLEKTPNELLVMIEITPQKEYRFERMNKIYALEMIKDFFPLIRREPGERETEFLKEELTNEERKRATAFDPEKNFISMEFFHVDEEPKEKNNAKYYKQYLAFEMEDKLMMVDVVNDTYYRGSQYALLKLLFDELEFPYEEAK |
| 4M0M Chain:A ((655-740)) | ---------------------EVLNFFNIPLPKLHSEVKEQIADKLKERLVDLKEKGMGNDVNAITRELGKAREDLIEHYKKT-----GELD-KIINKSMEELLVARK-------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4M0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12170 for 408 contacts (-29.8/contact) +
2D Compatibility (PS) -8171 + (NN) -1683 + (LL) 13400
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -13074.0 ( -32.04 by residue)
QMean score : 0.319
|
|
|