Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDREYLKQNPIV--EMIGYGTYNQPKGTWSDDSSLTFALMESLIS--GYDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKN-GVSVFECGGKDNFDNGNGAIMRIMPLVFYLGKDFSFGKKNKITEEV---TRITHAHPRSILGSYVYIELLQNLFANMDKKLAYEEMQNYIRKNYSDYPFKDELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
2WOE Chain:A ((11-280)) | ----------------VHDRALGAFLGLAVGDALGATVEFMTKGEIAQQYGIHRKMTGGGWLRLKPGQITDDTEMSLALGRSLAAKGTLDVADICEEFALWLKS-------RPVNVGNTCRRGIRRYMHEGTTTAP---YSEGDAGNGAAMRCLPAALA-----TLGHPADLEPWVLAQARITHNHPLSDAACLTLGRMVHHLIGGRGMKACREE-ANRLVHQHRDFHFEP----YKG--------------QSSAYIVDTMQTVLHYYFVTDTFKSCLIQTVNQGGDADTTGALAGMLAGATYGVDDIPSGWLSKLDMK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117925 for 2385 contacts (-49.4/contact) +
2D Compatibility (PS) -27398 + (NN) -8013 + (LL) 4676
1D Compatibility (HY) -10800 + (ID) 3850
Total energy: -163310.0 ( -68.47 by residue)
QMean score : 0.423
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