Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTSNINSELADGFQGYTDVRKITVNSTVDVGVSGSLTAVLGQVGSSFGLPGAIGGLGVGLVLDTILSLNGTKDTWKNSINEKMQDLEDWFRVEAK
1WDM Chain:C ((355-383))
---------------------------------ISGTLLNVMKQNGGTFGLSTMCIGLGQGI-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WDM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4166 for 116 contacts (-35.9/contact) +
2D Compatibility (PS) -2792 + (NN) 958 + (LL) 4164
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -5286.0 ( -45.57 by residue)
QMean score : -0.276
(partial model without unconserved sides chains):
PDB file :
Tito_1WDM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WDM-query.scw
PDB file :
Tito_Scwrl_1WDM.pdb
: