Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEVDKSTIGEVEGVTFQSYFLIKNMLHTRVVGDLEKRLPVTLEKMV-EYVESNRKEII-TPIFIVLNYV----GNVPYVDVYVGIDPYDE
1D5Y Chain:A ((221-288))
------------------------EYVMFTYEGL-GTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDDRPINLRCELLIPIRRK--
General information:
TITO was launched using:
RESULT:
Template:
1D5Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32137 for 328 contacts (-98.0/contact) +
2D Compatibility (PS) -6668 + (NN) -2337 + (LL) 2228
1D Compatibility (HY) -1600 + (ID) 100
Total energy: -40614.0 ( -123.82 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_1D5Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D5Y-query.scw
PDB file :
Tito_Scwrl_1D5Y.pdb
: