Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKLPPEADYLNDETLEVYE--NDKKKYDQTNQLITNNSVTILLGDFCYYESAWSSRWRDNRFWIGSKVS
1C76 Chain:A ((80-113))
-------ELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVV----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1C76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1701 for 115 contacts (-14.8/contact) +
2D Compatibility (PS) -3328 + (NN) 1330 + (LL) 2016
1D Compatibility (HY) -800 + (ID) 350
Total energy: -2833.0 ( -24.63 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_1C76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C76-query.scw
PDB file :
Tito_Scwrl_1C76.pdb
: